Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf2O35218 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf2O35218 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpsf2O35218 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Cpsf2O35218 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.11■□□□□ 0.17
Cpsf2O35218 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.11■□□□□ 0.17
Cpsf2O35218 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cpsf2O35218 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf2O35218 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cpsf2O35218 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cpsf2O35218 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.1■□□□□ 0.17
Cpsf2O35218 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cpsf2O35218 Gm8318-201ENSMUST00000182954 872 ntBASIC16.1■□□□□ 0.17
Cpsf2O35218 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cpsf2O35218 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf2O35218 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.09■□□□□ 0.17
Cpsf2O35218 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf2O35218 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf2O35218 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf2O35218 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cpsf2O35218 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf2O35218 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.09■□□□□ 0.17
Cpsf2O35218 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf2O35218 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf2O35218 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf2O35218 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
Cpsf2O35218 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf2O35218 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf2O35218 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cpsf2O35218 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cpsf2O35218 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf2O35218 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms