Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx1-1G3UXB3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx1-1G3UXB3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nkx1-1G3UXB3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx1-1G3UXB3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx1-1G3UXB3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx1-1G3UXB3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm24541-201ENSMUST00000103871 96 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm10012-202ENSMUST00000170379 372 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm3715-201ENSMUST00000172308 617 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm27243-201ENSMUST00000183964 521 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm43830-201ENSMUST00000198760 1067 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm43703-201ENSMUST00000200523 763 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx1-1G3UXB3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Gm14833-201ENSMUST00000118345 1027 ntBASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 CT025639.2-201ENSMUST00000224440 1220 ntBASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 AC140393.3-201ENSMUST00000228396 1352 ntBASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-1G3UXB3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-1G3UXB3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-1G3UXB3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-1G3UXB3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-1G3UXB3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-1G3UXB3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-1G3UXB3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Gm29516-201ENSMUST00000190402 468 ntBASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 AC153544.1-201ENSMUST00000217988 400 ntBASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx1-1G3UXB3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Mir5132-201ENSMUST00000175166 71 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm40332-201ENSMUST00000199847 938 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm18056-201ENSMUST00000207670 568 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm18061-201ENSMUST00000208350 562 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm18063-201ENSMUST00000208529 568 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm18052-201ENSMUST00000208750 559 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Gm17910-201ENSMUST00000211038 838 ntBASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-1G3UXB3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms