Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh11xF6ZNL5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh11xF6ZNL5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Gm9727-201ENSMUST00000161387 555 ntBASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh11xF6ZNL5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh11xF6ZNL5 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms