Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.33■□□□□ 0.84
Chd2E9PZM4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd2E9PZM4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd2E9PZM4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Chd2E9PZM4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd2E9PZM4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd2E9PZM4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Gm8775-201ENSMUST00000170943 1327 ntBASIC20.32■□□□□ 0.84
Chd2E9PZM4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.32■□□□□ 0.84
Chd2E9PZM4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Gm45841-201ENSMUST00000207700 164 ntBASIC20.32■□□□□ 0.84
Chd2E9PZM4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC20.32■□□□□ 0.84
Chd2E9PZM4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Gm43179-201ENSMUST00000198797 275 ntBASIC20.31■□□□□ 0.84
Chd2E9PZM4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.31■□□□□ 0.84
Chd2E9PZM4 Gm17794-201ENSMUST00000220252 955 ntBASIC20.31■□□□□ 0.84
Chd2E9PZM4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd2E9PZM4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.3■□□□□ 0.84
Chd2E9PZM4 Gm11661-201ENSMUST00000121761 1327 ntBASIC20.3■□□□□ 0.84
Chd2E9PZM4 Gm5425-201ENSMUST00000214125 459 ntBASIC20.3■□□□□ 0.84
Chd2E9PZM4 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.3■□□□□ 0.84
Chd2E9PZM4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Gm43195-201ENSMUST00000200614 2332 ntBASIC20.3■□□□□ 0.84
Chd2E9PZM4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Chd2E9PZM4 Gm18827-201ENSMUST00000188341 790 ntBASIC20.3■□□□□ 0.84
Chd2E9PZM4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.29■□□□□ 0.84
Chd2E9PZM4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd2E9PZM4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Gm6283-201ENSMUST00000182369 1000 ntBASIC20.28■□□□□ 0.84
Chd2E9PZM4 Gm27731-201ENSMUST00000185192 107 ntBASIC20.28■□□□□ 0.84
Chd2E9PZM4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd2E9PZM4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms