Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Gm12497-201ENSMUST00000138778 237 ntBASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28043E0CXC2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.11■□□□□ 0.01
Gm28043E0CXC2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm8825-201ENSMUST00000182565 998 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm4518-201ENSMUST00000182638 718 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Birc2-201ENSMUST00000054878 378 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms