Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm15920-201ENSMUST00000118998 402 ntBASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.71□□□□□ -0.05
Chd3B1AR17 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.71□□□□□ -0.05
Chd3B1AR17 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.71□□□□□ -0.05
Chd3B1AR17 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Chd3B1AR17 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Chd3B1AR17 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chd3B1AR17 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chd3B1AR17 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Chd3B1AR17 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Chd3B1AR17 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chd3B1AR17 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chd3B1AR17 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.7□□□□□ -0.06
Chd3B1AR17 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.7□□□□□ -0.06
Chd3B1AR17 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.7□□□□□ -0.06
Chd3B1AR17 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Chd3B1AR17 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Chd3B1AR17 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.7□□□□□ -0.06
Chd3B1AR17 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.7□□□□□ -0.06
Chd3B1AR17 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.7□□□□□ -0.06
Chd3B1AR17 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 BC037039-201ENSMUST00000192003 2205 ntBASIC14.7□□□□□ -0.06
Chd3B1AR17 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chd3B1AR17 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chd3B1AR17 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chd3B1AR17 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Chd3B1AR17 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Gm15693-201ENSMUST00000120470 637 ntBASIC14.69□□□□□ -0.06
Chd3B1AR17 Gm43767-201ENSMUST00000198933 381 ntBASIC14.69□□□□□ -0.06
Chd3B1AR17 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Chd3B1AR17 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Chd3B1AR17 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chd3B1AR17 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Chd3B1AR17 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.69□□□□□ -0.06
Chd3B1AR17 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.69□□□□□ -0.06
Chd3B1AR17 Gm2451-201ENSMUST00000199447 999 ntBASIC14.69□□□□□ -0.06
Chd3B1AR17 Gm10290-201ENSMUST00000200451 999 ntBASIC14.69□□□□□ -0.06
Chd3B1AR17 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms