Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Gm12928-201ENSMUST00000117115 573 ntBASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Gm15429-201ENSMUST00000151268 798 ntBASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 AC133598.1-201ENSMUST00000224327 660 ntBASIC23.33■■□□□ 1.33
Shroom2A2ALU4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC23.33■■□□□ 1.32
Shroom2A2ALU4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Shroom2A2ALU4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Gm22323-201ENSMUST00000103832 109 ntBASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Gm6916-202ENSMUST00000205523 195 ntBASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
Shroom2A2ALU4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Gm14263-201ENSMUST00000117955 746 ntBASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Gm2383-201ENSMUST00000181461 807 ntBASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Gm33320-201ENSMUST00000192232 530 ntBASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shroom2A2ALU4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Shroom2A2ALU4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Gm45751-201ENSMUST00000210185 1573 ntBASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC23.3■■□□□ 1.32
Shroom2A2ALU4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Gm45098-201ENSMUST00000207179 657 ntBASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC23.29■■□□□ 1.32
Shroom2A2ALU4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC23.28■■□□□ 1.32
Shroom2A2ALU4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Gm15460-201ENSMUST00000118147 391 ntBASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Gm12749-201ENSMUST00000122138 1159 ntBASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Gm9445-201ENSMUST00000207454 1285 ntBASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom2A2ALU4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Gm11628-201ENSMUST00000117568 171 ntBASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Gm11793-201ENSMUST00000120433 981 ntBASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Gm16177-201ENSMUST00000120728 718 ntBASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Mir7032-201ENSMUST00000185154 79 ntBASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms