Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IsxA1A546 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IsxA1A546 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
IsxA1A546 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.03□□□□□ -0.16
IsxA1A546 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
IsxA1A546 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IsxA1A546 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.02□□□□□ -0.16
IsxA1A546 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
IsxA1A546 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IsxA1A546 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
IsxA1A546 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Gm16061-201ENSMUST00000122167 857 ntBASIC14.02□□□□□ -0.17
IsxA1A546 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Gm6659-201ENSMUST00000174752 547 ntBASIC14.02□□□□□ -0.17
IsxA1A546 Mir6404-201ENSMUST00000183699 94 ntBASIC14.02□□□□□ -0.17
IsxA1A546 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.02□□□□□ -0.17
IsxA1A546 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
IsxA1A546 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IsxA1A546 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IsxA1A546 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IsxA1A546 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.01□□□□□ -0.17
IsxA1A546 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IsxA1A546 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IsxA1A546 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IsxA1A546 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.01□□□□□ -0.17
IsxA1A546 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.01□□□□□ -0.17
IsxA1A546 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IsxA1A546 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.01□□□□□ -0.17
IsxA1A546 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IsxA1A546 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IsxA1A546 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IsxA1A546 Gm43056-201ENSMUST00000197865 2791 ntBASIC14□□□□□ -0.17
IsxA1A546 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14□□□□□ -0.17
IsxA1A546 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14□□□□□ -0.17
IsxA1A546 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IsxA1A546 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
IsxA1A546 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14□□□□□ -0.17
IsxA1A546 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14□□□□□ -0.17
IsxA1A546 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14□□□□□ -0.17
IsxA1A546 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14□□□□□ -0.17
IsxA1A546 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IsxA1A546 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms