Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Olfr129-201ENSMUST00000122318 993 ntBASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Gm8655-201ENSMUST00000221159 852 ntBASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Gm27742-201ENSMUST00000184667 60 ntBASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-1A0N8R0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms