Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm5587-201ENSMUST00000206270 674 ntBASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm11950-201ENSMUST00000121615 838 ntBASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms