Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.35□□□□□ -0.43
Trav18A0A075B656 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav18A0A075B656 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav18A0A075B656 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Celf4-206ENSMUST00000224553 1729 ntBASIC12.34□□□□□ -0.43
Trav18A0A075B656 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Gm17807-201ENSMUST00000186869 298 ntBASIC12.34□□□□□ -0.43
Trav18A0A075B656 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.34□□□□□ -0.43
Trav18A0A075B656 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.34□□□□□ -0.43
Trav18A0A075B656 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav18A0A075B656 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav18A0A075B656 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav18A0A075B656 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav18A0A075B656 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav18A0A075B656 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav18A0A075B656 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms