Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm45167-201ENSMUST00000208007 322 ntBASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Grk6-207ENSMUST00000225925 2769 ntBASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl40Q9Z2Q5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl40Q9Z2Q5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm11764-201ENSMUST00000120221 623 ntBASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm37153-201ENSMUST00000193637 231 ntBASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mrpl40Q9Z2Q5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mrpl40Q9Z2Q5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mrpl40Q9Z2Q5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Mrpl40Q9Z2Q5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Mrpl40Q9Z2Q5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mrpl40Q9Z2Q5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.08■□□□□ 0
Mrpl40Q9Z2Q5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mrpl40Q9Z2Q5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mrpl40Q9Z2Q5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Mrpl40Q9Z2Q5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.08■□□□□ 0
Mrpl40Q9Z2Q5 Gm23935-201ENSMUST00000102303 57 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms