Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.77■□□□□ 0.43
Hmg20bQ9Z104 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Hmg20bQ9Z104 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmg20bQ9Z104 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hmg20bQ9Z104 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmg20bQ9Z104 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm12008-201ENSMUST00000117791 755 ntBASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm18733-201ENSMUST00000173950 856 ntBASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmg20bQ9Z104 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmg20bQ9Z104 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmg20bQ9Z104 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms