Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Gm38280-201ENSMUST00000192610 158 ntBASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Gm36967-201ENSMUST00000193814 266 ntBASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Gm7774-201ENSMUST00000200064 533 ntBASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 AC154245.1-201ENSMUST00000224615 601 ntBASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx6Q9R1R0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm18829-201ENSMUST00000188150 1622 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm11858-201ENSMUST00000117935 838 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm11637-201ENSMUST00000120601 592 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm11745-201ENSMUST00000121669 448 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Mir6420-201ENSMUST00000185032 102 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm45612-201ENSMUST00000211320 160 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm9172-201ENSMUST00000212092 954 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.3□□□□□ -0.12
Lhx6Q9R1R0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gm14739-201ENSMUST00000120424 802 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Mir1938-201ENSMUST00000158746 100 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 AC153968.2-201ENSMUST00000215579 1140 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 AC173482.2-201ENSMUST00000224044 750 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms