Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Ank2-226ENSMUST00000189368 339 ntBASIC14.7□□□□□ -0.06
Cdh17Q9R100 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.7□□□□□ -0.06
Cdh17Q9R100 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh17Q9R100 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.69□□□□□ -0.06
Cdh17Q9R100 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.69□□□□□ -0.06
Cdh17Q9R100 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.69□□□□□ -0.06
Cdh17Q9R100 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.69□□□□□ -0.06
Cdh17Q9R100 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.69□□□□□ -0.06
Cdh17Q9R100 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdh17Q9R100 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Carlr-201ENSMUST00000181515 2574 ntBASIC14.68□□□□□ -0.06
Cdh17Q9R100 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Gm37153-201ENSMUST00000193637 231 ntBASIC14.68□□□□□ -0.06
Cdh17Q9R100 Gm6089-201ENSMUST00000197666 938 ntBASIC14.68□□□□□ -0.06
Cdh17Q9R100 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.68□□□□□ -0.06
Cdh17Q9R100 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh17Q9R100 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms