Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.81□□□□□ -0.36
Six6Q9QZ28 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gm12933-201ENSMUST00000120203 872 ntBASIC12.81□□□□□ -0.36
Six6Q9QZ28 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Six6Q9QZ28 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six6Q9QZ28 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.8□□□□□ -0.36
Six6Q9QZ28 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm15378-201ENSMUST00000121894 207 ntBASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.8□□□□□ -0.36
Six6Q9QZ28 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.8□□□□□ -0.36
Six6Q9QZ28 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.8□□□□□ -0.36
Six6Q9QZ28 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six6Q9QZ28 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Gm10698-201ENSMUST00000182663 604 ntBASIC12.79□□□□□ -0.36
Six6Q9QZ28 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.79□□□□□ -0.36
Six6Q9QZ28 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six6Q9QZ28 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms