Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trem1Q9JKE2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trem1Q9JKE2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Gm5643-201ENSMUST00000117081 966 ntBASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Gm12527-201ENSMUST00000117967 564 ntBASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.52□□□□□ -0.25
Trem1Q9JKE2 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trem1Q9JKE2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.51□□□□□ -0.25
Trem1Q9JKE2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Gm15378-201ENSMUST00000121894 207 ntBASIC13.51□□□□□ -0.25
Trem1Q9JKE2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trem1Q9JKE2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms