Protein–RNA interactions for Protein: Q9JHW9

Aldh1a3, Aldehyde dehydrogenase family 1 member A3, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a3Q9JHW9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Gm15427-201ENSMUST00000117288 531 ntBASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aldh1a3Q9JHW9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Gm2272-201ENSMUST00000194903 582 ntBASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Aldh1a3Q9JHW9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Mir1895-201ENSMUST00000122615 79 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Aldh1a3Q9JHW9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Aldh1a3Q9JHW9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Aldh1a3Q9JHW9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Aldh1a3Q9JHW9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Aldh1a3Q9JHW9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Aldh1a3Q9JHW9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 App-207ENSMUST00000227737 2827 ntBASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.45■□□□□ 0.06
Aldh1a3Q9JHW9 Gm11025-201ENSMUST00000140773 466 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms