Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Gm43767-201ENSMUST00000198933 381 ntBASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tmem54Q9D7S1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm5177-201ENSMUST00000183092 997 ntBASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Mir8117-201ENSMUST00000184773 107 ntBASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm8000-201ENSMUST00000188378 592 ntBASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tmem54Q9D7S1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Gm14494-201ENSMUST00000118786 435 ntBASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Gm5264-201ENSMUST00000190584 848 ntBASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Gm17968-201ENSMUST00000194902 784 ntBASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tmem54Q9D7S1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.17□□□□□ -0.3
Tmem54Q9D7S1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tmem54Q9D7S1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tmem54Q9D7S1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms