Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.89■□□□□ 0.3
Smc1aQ9CU62 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Gm27397-201ENSMUST00000184997 107 ntBASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.89■□□□□ 0.29
Smc1aQ9CU62 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smc1aQ9CU62 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.89■□□□□ 0.29
Smc1aQ9CU62 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.88■□□□□ 0.29
Smc1aQ9CU62 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smc1aQ9CU62 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Gm23935-201ENSMUST00000102303 57 ntBASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Gm24270-201ENSMUST00000102326 57 ntBASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Gm24245-201ENSMUST00000157318 57 ntBASIC16.86■□□□□ 0.29
Smc1aQ9CU62 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc1aQ9CU62 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms