Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gm8318-201ENSMUST00000182954 872 ntBASIC12.36□□□□□ -0.43
Rer1Q9CQU3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.36□□□□□ -0.43
Rer1Q9CQU3 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Efs-202ENSMUST00000227037 2540 ntBASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rer1Q9CQU3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Gm18669-201ENSMUST00000216049 778 ntBASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rer1Q9CQU3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rer1Q9CQU3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rer1Q9CQU3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rer1Q9CQU3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rer1Q9CQU3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.33□□□□□ -0.44
Rer1Q9CQU3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rer1Q9CQU3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.33□□□□□ -0.44
Rer1Q9CQU3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms