Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm7Q9CQQ8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm7Q9CQQ8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Gm8396-201ENSMUST00000057361 823 ntBASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Lsm7Q9CQQ8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Gm13365-201ENSMUST00000121188 973 ntBASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms