Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.96□□□□□ -0.01
Trim33Q99PP7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.96□□□□□ -0.01
Trim33Q99PP7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.96□□□□□ -0.01
Trim33Q99PP7 Gm9682-201ENSMUST00000197505 556 ntBASIC14.96□□□□□ -0.01
Trim33Q99PP7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim33Q99PP7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim33Q99PP7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim33Q99PP7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.96□□□□□ -0.02
Trim33Q99PP7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim33Q99PP7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Trim33Q99PP7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim33Q99PP7 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.95□□□□□ -0.02
Trim33Q99PP7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.95□□□□□ -0.02
Trim33Q99PP7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim33Q99PP7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.94□□□□□ -0.02
Trim33Q99PP7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.94□□□□□ -0.02
Trim33Q99PP7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.94□□□□□ -0.02
Trim33Q99PP7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.94□□□□□ -0.02
Trim33Q99PP7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.94□□□□□ -0.02
Trim33Q99PP7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim33Q99PP7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trim33Q99PP7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim33Q99PP7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms