Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim8Q99PJ2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Gm27704-201ENSMUST00000185094 107 ntBASIC14.8□□□□□ -0.04
Trim8Q99PJ2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim8Q99PJ2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Gm27867-201ENSMUST00000184778 125 ntBASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Gm44454-201ENSMUST00000198541 138 ntBASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim8Q99PJ2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Gm25745-201ENSMUST00000174945 133 ntBASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Ank2-226ENSMUST00000189368 339 ntBASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim8Q99PJ2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms