Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm14859-201ENSMUST00000117752 357 ntBASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Gm33142-201ENSMUST00000193913 867 ntBASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Gm8655-201ENSMUST00000221159 852 ntBASIC14.24□□□□□ -0.13
Nkd1Q99MH6 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.24□□□□□ -0.13
Nkd1Q99MH6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd1Q99MH6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd1Q99MH6 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.22□□□□□ -0.13
Nkd1Q99MH6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.22□□□□□ -0.13
Nkd1Q99MH6 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.22□□□□□ -0.13
Nkd1Q99MH6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.22□□□□□ -0.13
Nkd1Q99MH6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms