Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Gm22189-201ENSMUST00000103822 86 ntBASIC18.51■□□□□ 0.55
RtcbQ99LF4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Gm12091-201ENSMUST00000146791 830 ntBASIC18.51■□□□□ 0.55
RtcbQ99LF4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Gm9908-201ENSMUST00000211534 448 ntBASIC18.51■□□□□ 0.55
RtcbQ99LF4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.51■□□□□ 0.55
RtcbQ99LF4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RtcbQ99LF4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Gm3436-201ENSMUST00000179930 840 ntBASIC18.5■□□□□ 0.55
RtcbQ99LF4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.5■□□□□ 0.55
RtcbQ99LF4 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.5■□□□□ 0.55
RtcbQ99LF4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RtcbQ99LF4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.49■□□□□ 0.55
RtcbQ99LF4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Dupd1-202ENSMUST00000224735 548 ntBASIC18.49■□□□□ 0.55
RtcbQ99LF4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RtcbQ99LF4 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.49■□□□□ 0.55
RtcbQ99LF4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.48■□□□□ 0.55
RtcbQ99LF4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.48■□□□□ 0.55
RtcbQ99LF4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RtcbQ99LF4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.47■□□□□ 0.55
RtcbQ99LF4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RtcbQ99LF4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RtcbQ99LF4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RtcbQ99LF4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RtcbQ99LF4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.47■□□□□ 0.55
RtcbQ99LF4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.47■□□□□ 0.55
RtcbQ99LF4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms