Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Gm18246-201ENSMUST00000221023 728 ntBASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb1Q91Y08 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Gm15590-201ENSMUST00000078419 552 ntBASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb1Q91Y08 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Gm44771-201ENSMUST00000206975 626 ntBASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.65■□□□□ 0.1
Pcdhb1Q91Y08 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.64■□□□□ 0.1
Pcdhb1Q91Y08 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Gm27628-201ENSMUST00000184911 107 ntBASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms