Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Celf4-206ENSMUST00000224553 1729 ntBASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Mir8102-201ENSMUST00000184148 139 ntBASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Gm27989-201ENSMUST00000184721 107 ntBASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chmp7Q8R1T1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Gm18766-201ENSMUST00000189811 808 ntBASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp7Q8R1T1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Gm28630-201ENSMUST00000187806 498 ntBASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp7Q8R1T1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Gm5866-201ENSMUST00000177881 973 ntBASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp7Q8R1T1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp7Q8R1T1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms