Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Gm6345-202ENSMUST00000180900 204 ntBASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Gm11950-201ENSMUST00000121615 838 ntBASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nudcd3Q8R1N4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nudcd3Q8R1N4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Nudcd3Q8R1N4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nudcd3Q8R1N4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nudcd3Q8R1N4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Nudcd3Q8R1N4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Gm15794-201ENSMUST00000120182 631 ntBASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nudcd3Q8R1N4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms