Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trpm6Q8CIR4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trpm6Q8CIR4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.08■□□□□ 0
Trpm6Q8CIR4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.07■□□□□ 0
Trpm6Q8CIR4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.07■□□□□ 0
Trpm6Q8CIR4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.07■□□□□ 0
Trpm6Q8CIR4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.06■□□□□ 0
Trpm6Q8CIR4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trpm6Q8CIR4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ 0
Trpm6Q8CIR4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Mir7684-201ENSMUST00000183858 60 ntBASIC15.05■□□□□ 0
Trpm6Q8CIR4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Gm2423-201ENSMUST00000074863 733 ntBASIC15.05■□□□□ 0
Trpm6Q8CIR4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trpm6Q8CIR4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trpm6Q8CIR4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Gm13453-201ENSMUST00000118708 357 ntBASIC15.05■□□□□ -0
Trpm6Q8CIR4 Gm12151-201ENSMUST00000121374 290 ntBASIC15.05■□□□□ -0
Trpm6Q8CIR4 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.05■□□□□ -0
Trpm6Q8CIR4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trpm6Q8CIR4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trpm6Q8CIR4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trpm6Q8CIR4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trpm6Q8CIR4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trpm6Q8CIR4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.04■□□□□ -0
Trpm6Q8CIR4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Trpm6Q8CIR4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trpm6Q8CIR4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms