Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfwd3Q8CIK8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rfwd3Q8CIK8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfwd3Q8CIK8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfwd3Q8CIK8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfwd3Q8CIK8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Rfwd3Q8CIK8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Gm1401-201ENSMUST00000122048 772 ntBASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfwd3Q8CIK8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm4899-201ENSMUST00000178708 719 ntBASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Rfwd3Q8CIK8 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfwd3Q8CIK8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms