Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Eri3Q8C460 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Eri3Q8C460 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Eri3Q8C460 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Eri3Q8C460 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Eri3Q8C460 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Eri3Q8C460 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.33□□□□□ -0.12
Eri3Q8C460 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Gm1401-201ENSMUST00000122048 772 ntBASIC14.33□□□□□ -0.12
Eri3Q8C460 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.33□□□□□ -0.12
Eri3Q8C460 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Eri3Q8C460 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.33□□□□□ -0.12
Eri3Q8C460 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Eri3Q8C460 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Celf4-206ENSMUST00000224553 1729 ntBASIC14.32□□□□□ -0.12
Eri3Q8C460 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Eri3Q8C460 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Gm14140-201ENSMUST00000119999 995 ntBASIC14.32□□□□□ -0.12
Eri3Q8C460 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Psmb5-202ENSMUST00000227257 622 ntBASIC14.32□□□□□ -0.12
Eri3Q8C460 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Eri3Q8C460 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.32□□□□□ -0.12
Eri3Q8C460 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Eri3Q8C460 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Eri3Q8C460 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Eri3Q8C460 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.31□□□□□ -0.12
Eri3Q8C460 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Eri3Q8C460 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Eri3Q8C460 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms