Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.27■□□□□ 0.04
Usp43Q8BUM9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.27■□□□□ 0.04
Usp43Q8BUM9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp43Q8BUM9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.26■□□□□ 0.03
Usp43Q8BUM9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Usp43Q8BUM9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.25■□□□□ 0.03
Usp43Q8BUM9 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.25■□□□□ 0.03
Usp43Q8BUM9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.24■□□□□ 0.03
Usp43Q8BUM9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms