Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Gm13418-201ENSMUST00000119097 944 ntBASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nucks1Q80XU3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nucks1Q80XU3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms