Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc28Q80XJ3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ttc28Q80XJ3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm29310-201ENSMUST00000185468 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21825-201ENSMUST00000185728 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm29109-201ENSMUST00000185895 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21896-201ENSMUST00000186520 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21873-201ENSMUST00000186728 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21794-201ENSMUST00000187056 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21880-201ENSMUST00000187275 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21826-201ENSMUST00000187451 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21198-201ENSMUST00000188393 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21749-201ENSMUST00000189343 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21901-201ENSMUST00000189568 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm29424-201ENSMUST00000189716 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm28599-201ENSMUST00000189838 694 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21867-201ENSMUST00000189917 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm29269-201ENSMUST00000190087 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21722-201ENSMUST00000190153 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm28423-201ENSMUST00000190701 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21899-201ENSMUST00000190745 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21910-201ENSMUST00000191163 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21849-201ENSMUST00000191571 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm28678-201ENSMUST00000191593 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm20910-201ENSMUST00000193268 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm21871-201ENSMUST00000194621 696 ntBASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.58□□□□□ -0.4
Ttc28Q80XJ3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ttc28Q80XJ3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm15824-201ENSMUST00000119516 955 ntBASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm18624-201ENSMUST00000220966 658 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms