Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm37917-201ENSMUST00000194711 392 ntBASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Gm45453-201ENSMUST00000211758 853 ntBASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap1Q80TE0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap1Q80TE0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap1Q80TE0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap1Q80TE0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap1Q80TE0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpap1Q80TE0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Gm7390-201ENSMUST00000212452 1216 ntBASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Rpap1Q80TE0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpap1Q80TE0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Olfr286-202ENSMUST00000205305 969 ntBASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpap1Q80TE0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Trav13-3-201ENSMUST00000117226 336 ntBASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Gm7820-201ENSMUST00000121012 1052 ntBASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Gm10766-202ENSMUST00000194123 606 ntBASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Gm18624-201ENSMUST00000220966 658 ntBASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpap1Q80TE0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC23.1■■□□□ 1.29
Rpap1Q80TE0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Gm13829-201ENSMUST00000119600 138 ntBASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms