Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm15653-201ENSMUST00000119247 907 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm14042-201ENSMUST00000120139 833 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm29310-201ENSMUST00000185468 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21825-201ENSMUST00000185728 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm29109-201ENSMUST00000185895 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21896-201ENSMUST00000186520 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21873-201ENSMUST00000186728 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21794-201ENSMUST00000187056 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21880-201ENSMUST00000187275 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21826-201ENSMUST00000187451 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21198-201ENSMUST00000188393 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21749-201ENSMUST00000189343 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21901-201ENSMUST00000189568 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm29424-201ENSMUST00000189716 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm28599-201ENSMUST00000189838 694 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21867-201ENSMUST00000189917 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm29269-201ENSMUST00000190087 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21722-201ENSMUST00000190153 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm28423-201ENSMUST00000190701 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21899-201ENSMUST00000190745 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21910-201ENSMUST00000191163 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21849-201ENSMUST00000191571 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm28678-201ENSMUST00000191593 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm20910-201ENSMUST00000193268 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm21871-201ENSMUST00000194621 696 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Gm6745-201ENSMUST00000199216 526 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Dupd1-202ENSMUST00000224735 548 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Gm23984-201ENSMUST00000157139 203 ntBASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Gm8515-201ENSMUST00000194852 576 ntBASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx55Q6ZPL9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Gm20445-201ENSMUST00000061905 565 ntBASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.04■□□□□ 0.32
Ddx55Q6ZPL9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx55Q6ZPL9 Gm3436-201ENSMUST00000179930 840 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms