Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herc4Q6PAV2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.65■□□□□ 0.26
Herc4Q6PAV2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Herc4Q6PAV2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Gm27300-201ENSMUST00000184085 97 ntBASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Gm27335-201ENSMUST00000184758 97 ntBASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herc4Q6PAV2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.63■□□□□ 0.25
Herc4Q6PAV2 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms