Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.29■□□□□ 0.04
Casc4Q6P2L7 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm1401-201ENSMUST00000122048 772 ntBASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm6443-201ENSMUST00000203599 874 ntBASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Casc4Q6P2L7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Gm5364-201ENSMUST00000216789 889 ntBASIC15.27■□□□□ 0.04
Casc4Q6P2L7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Casc4Q6P2L7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.27■□□□□ 0.03
Casc4Q6P2L7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Casc4Q6P2L7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Casc4Q6P2L7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Casc4Q6P2L7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 AW822252-206ENSMUST00000208904 237 ntBASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Casc4Q6P2L7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms