Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga7Q6DD96 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Gm8318-201ENSMUST00000182954 872 ntBASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga7Q6DD96 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga7Q6DD96 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms