Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Gm11478-201ENSMUST00000117851 599 ntBASIC12.54□□□□□ -0.4
Hcfc1Q61191 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.54□□□□□ -0.4
Hcfc1Q61191 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.53□□□□□ -0.4
Hcfc1Q61191 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Gm12091-201ENSMUST00000146791 830 ntBASIC12.53□□□□□ -0.4
Hcfc1Q61191 Gm9908-201ENSMUST00000211534 448 ntBASIC12.53□□□□□ -0.4
Hcfc1Q61191 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.53□□□□□ -0.4
Hcfc1Q61191 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hcfc1Q61191 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.52□□□□□ -0.4
Hcfc1Q61191 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.52□□□□□ -0.4
Hcfc1Q61191 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Gm11918-201ENSMUST00000121660 179 ntBASIC12.52□□□□□ -0.41
Hcfc1Q61191 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.52□□□□□ -0.41
Hcfc1Q61191 AY702102-202ENSMUST00000194651 1173 ntBASIC12.52□□□□□ -0.41
Hcfc1Q61191 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hcfc1Q61191 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hcfc1Q61191 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms