Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.28■□□□□ 0.36
Scnn1aQ61180 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Gm7063-201ENSMUST00000186840 981 ntBASIC17.28■□□□□ 0.36
Scnn1aQ61180 Gm18049-201ENSMUST00000208909 581 ntBASIC17.28■□□□□ 0.36
Scnn1aQ61180 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.28■□□□□ 0.36
Scnn1aQ61180 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scnn1aQ61180 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.28■□□□□ 0.36
Scnn1aQ61180 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.28■□□□□ 0.36
Scnn1aQ61180 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scnn1aQ61180 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Gm13015-201ENSMUST00000118674 204 ntBASIC17.27■□□□□ 0.36
Scnn1aQ61180 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Mir7023-201ENSMUST00000185093 64 ntBASIC17.27■□□□□ 0.36
Scnn1aQ61180 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Gm15823-201ENSMUST00000064305 670 ntBASIC17.27■□□□□ 0.36
Scnn1aQ61180 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Scnn1aQ61180 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scnn1aQ61180 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scnn1aQ61180 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Scnn1aQ61180 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scnn1aQ61180 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scnn1aQ61180 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scnn1aQ61180 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.27■□□□□ 0.35
Scnn1aQ61180 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Gm6415-201ENSMUST00000118488 348 ntBASIC17.26■□□□□ 0.35
Scnn1aQ61180 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Gm29541-201ENSMUST00000191351 678 ntBASIC17.26■□□□□ 0.35
Scnn1aQ61180 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scnn1aQ61180 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.25■□□□□ 0.35
Scnn1aQ61180 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.25■□□□□ 0.35
Scnn1aQ61180 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.25■□□□□ 0.35
Scnn1aQ61180 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scnn1aQ61180 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms