Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scarb1Q61009 Gm43799-201ENSMUST00000201845 579 ntBASIC12.74□□□□□ -0.37
Scarb1Q61009 Gm18101-201ENSMUST00000215769 548 ntBASIC12.74□□□□□ -0.37
Scarb1Q61009 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scarb1Q61009 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scarb1Q61009 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scarb1Q61009 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scarb1Q61009 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.74□□□□□ -0.37
Scarb1Q61009 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scarb1Q61009 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Mir770-201ENSMUST00000103252 94 ntBASIC12.73□□□□□ -0.37
Scarb1Q61009 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.73□□□□□ -0.37
Scarb1Q61009 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Scarb1Q61009 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.73□□□□□ -0.37
Scarb1Q61009 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scarb1Q61009 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Scarb1Q61009 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.72□□□□□ -0.37
Scarb1Q61009 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.72□□□□□ -0.37
Scarb1Q61009 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.72□□□□□ -0.37
Scarb1Q61009 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.72□□□□□ -0.37
Scarb1Q61009 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.72□□□□□ -0.37
Scarb1Q61009 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.72□□□□□ -0.37
Scarb1Q61009 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.72□□□□□ -0.37
Scarb1Q61009 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.72□□□□□ -0.37
Scarb1Q61009 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.72□□□□□ -0.37
Scarb1Q61009 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scarb1Q61009 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Scarb1Q61009 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scarb1Q61009 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.71□□□□□ -0.37
Scarb1Q61009 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.71□□□□□ -0.37
Scarb1Q61009 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Scarb1Q61009 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Scarb1Q61009 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.71□□□□□ -0.37
Scarb1Q61009 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.71□□□□□ -0.37
Scarb1Q61009 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Scarb1Q61009 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms