Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Mir3113-201ENSMUST00000175478 76 ntBASIC14.41□□□□□ -0.1
Xrcc1Q60596 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.41□□□□□ -0.1
Xrcc1Q60596 Gm17968-201ENSMUST00000194902 784 ntBASIC14.41□□□□□ -0.1
Xrcc1Q60596 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Xrcc1Q60596 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.4□□□□□ -0.1
Xrcc1Q60596 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.4□□□□□ -0.1
Xrcc1Q60596 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Gm12008-201ENSMUST00000117791 755 ntBASIC14.4□□□□□ -0.1
Xrcc1Q60596 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Xrcc1Q60596 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Gm5177-201ENSMUST00000183092 997 ntBASIC14.39□□□□□ -0.11
Xrcc1Q60596 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.39□□□□□ -0.11
Xrcc1Q60596 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms