Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Rps4l-201ENSMUST00000071745 943 ntBASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.99□□□□□ -0.33
Trav5d-4Q5R1F6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Gm11452-201ENSMUST00000122376 690 ntBASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav5d-4Q5R1F6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Gm7153-201ENSMUST00000117092 455 ntBASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Gm15173-201ENSMUST00000122049 433 ntBASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Gm10499-201ENSMUST00000174094 934 ntBASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav5d-4Q5R1F6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms