Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Gm8344-201ENSMUST00000119813 856 ntBASIC14.92□□□□□ -0.02
Scn2bQ56A07 Gm11452-201ENSMUST00000122376 690 ntBASIC14.92□□□□□ -0.02
Scn2bQ56A07 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.92□□□□□ -0.02
Scn2bQ56A07 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn2bQ56A07 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.91□□□□□ -0.02
Scn2bQ56A07 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn2bQ56A07 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.91□□□□□ -0.02
Scn2bQ56A07 Gm8655-201ENSMUST00000221159 852 ntBASIC14.91□□□□□ -0.02
Scn2bQ56A07 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn2bQ56A07 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Gm15358-201ENSMUST00000119249 520 ntBASIC14.9□□□□□ -0.02
Scn2bQ56A07 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Gm6376-201ENSMUST00000209407 580 ntBASIC14.9□□□□□ -0.02
Scn2bQ56A07 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Gm7461-201ENSMUST00000058918 827 ntBASIC14.9□□□□□ -0.02
Scn2bQ56A07 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.9□□□□□ -0.02
Scn2bQ56A07 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.9□□□□□ -0.02
Scn2bQ56A07 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn2bQ56A07 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.89□□□□□ -0.03
Scn2bQ56A07 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn2bQ56A07 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.89□□□□□ -0.03
Scn2bQ56A07 Rps4l-201ENSMUST00000071745 943 ntBASIC14.89□□□□□ -0.03
Scn2bQ56A07 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn2bQ56A07 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms