Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm22065-201ENSMUST00000103753 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm22066-201ENSMUST00000103761 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24932-201ENSMUST00000103763 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24115-201ENSMUST00000103799 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm22190-201ENSMUST00000103827 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm22191-201ENSMUST00000103831 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24721-201ENSMUST00000103849 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm28018-201ENSMUST00000103869 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm26399-201ENSMUST00000103937 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Mir449b-201ENSMUST00000104833 80 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm25349-201ENSMUST00000177728 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm23616-201ENSMUST00000177797 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm25871-201ENSMUST00000177816 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24752-201ENSMUST00000178240 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24496-201ENSMUST00000178287 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm25649-201ENSMUST00000178476 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm25548-201ENSMUST00000178681 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm23147-201ENSMUST00000178841 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm26095-201ENSMUST00000179270 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm22171-201ENSMUST00000179283 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm23936-201ENSMUST00000179354 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm22619-201ENSMUST00000179516 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm25255-201ENSMUST00000179579 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24755-201ENSMUST00000179691 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm26506-201ENSMUST00000179692 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm25086-201ENSMUST00000179931 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm23243-201ENSMUST00000180047 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24659-201ENSMUST00000180212 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm24169-201ENSMUST00000180244 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm23689-201ENSMUST00000180354 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm27359-201ENSMUST00000184153 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm27785-201ENSMUST00000184268 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm27466-201ENSMUST00000184396 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm27703-201ENSMUST00000184836 110 ntBASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm25287-201ENSMUST00000103846 110 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm22918-201ENSMUST00000103855 110 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm15483-201ENSMUST00000120338 456 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm18737-201ENSMUST00000173594 937 ntBASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf38aQ4FK66 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Gm25948-201ENSMUST00000175334 112 ntBASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf38aQ4FK66 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms