Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim72Q1XH17 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim72Q1XH17 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim72Q1XH17 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim72Q1XH17 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Trim72Q1XH17 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.08■□□□□ 0.17
Trim72Q1XH17 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim72Q1XH17 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim72Q1XH17 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim72Q1XH17 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim72Q1XH17 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trim72Q1XH17 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.08■□□□□ 0.16
Trim72Q1XH17 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim72Q1XH17 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim72Q1XH17 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.07■□□□□ 0.16
Trim72Q1XH17 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.07■□□□□ 0.16
Trim72Q1XH17 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trim72Q1XH17 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.06■□□□□ 0.16
Trim72Q1XH17 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.06■□□□□ 0.16
Trim72Q1XH17 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim72Q1XH17 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim72Q1XH17 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.05■□□□□ 0.16
Trim72Q1XH17 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms