Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Gm5279-201ENSMUST00000199575 745 ntBASIC13.37□□□□□ -0.27
Chd8Q09XV5 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.37□□□□□ -0.27
Chd8Q09XV5 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.37□□□□□ -0.27
Chd8Q09XV5 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.37□□□□□ -0.27
Chd8Q09XV5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chd8Q09XV5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd8Q09XV5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Gm3508-201ENSMUST00000186012 792 ntBASIC13.36□□□□□ -0.27
Chd8Q09XV5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.36□□□□□ -0.27
Chd8Q09XV5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chd8Q09XV5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.36□□□□□ -0.27
Chd8Q09XV5 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.36□□□□□ -0.27
Chd8Q09XV5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd8Q09XV5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Gm12566-201ENSMUST00000121479 359 ntBASIC13.35□□□□□ -0.27
Chd8Q09XV5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.35□□□□□ -0.27
Chd8Q09XV5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.35□□□□□ -0.27
Chd8Q09XV5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chd8Q09XV5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Gm14381-201ENSMUST00000122105 414 ntBASIC13.34□□□□□ -0.27
Chd8Q09XV5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms