Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.44□□□□□ -0.1
Hoxc4Q08624 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 AA543401-201ENSMUST00000164248 1269 ntBASIC14.44□□□□□ -0.1
Hoxc4Q08624 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.44□□□□□ -0.1
Hoxc4Q08624 Gm18049-201ENSMUST00000208909 581 ntBASIC14.44□□□□□ -0.1
Hoxc4Q08624 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc4Q08624 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc4Q08624 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Asic1-205ENSMUST00000228185 1818 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Gm8749-201ENSMUST00000117737 331 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Gm13464-201ENSMUST00000119418 935 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Gm5479-201ENSMUST00000160578 435 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.43□□□□□ -0.1
Hoxc4Q08624 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc4Q08624 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Gm10576-201ENSMUST00000191927 825 ntBASIC14.42□□□□□ -0.1
Hoxc4Q08624 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc4Q08624 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Gm5779-201ENSMUST00000218467 910 ntBASIC14.41□□□□□ -0.1
Hoxc4Q08624 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.41□□□□□ -0.1
Hoxc4Q08624 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.41□□□□□ -0.1
Hoxc4Q08624 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms